| 2006 UBBL Draft Grid | ||||||
| 1 | 2 | 3 | 4 | 5 | ||
| 1 | ROG | Francisco Liriano (ROG) | Chuck James (MID) | Jason Vargas (ROG) | Jeremy Accardo (MID) | Brian Moehler (CAL) |
| 2 | MID | Hanley Ramirez (MID) | Anthony Reyes (MID) | Nate McLouth (MID) | Franklin Gutierrez (ROG) | Jeremy Sowers (U1-MID) |
| 3 | MAD | Jon Papelbon (MAD) | Lastings Milledge (U1-BAL) | Chad Orvella (MAD) | Craig Hansen (BAL) | Jeff Clement (U1-MAD) |
| 4 | PHI | Brian McCann (PHI) | Matt Murton (PHI) | Shane Victorino (PHI) | Kendry Morales (U2-PHI) | Wil Cordero (PUG) |
| 5 | BET | Bobby Jenks (BET) | Jon Lester (U2-BAL) | Mike Jacobs (BET) | Philip Hughes (U2-BET) | Esteban German (BET) |
| 6 | ALL | Jeremy Hermida (ALL) | Sal Fasano (ANT) | Ronny Paulino (ALL) | Al Leiter (ANT) | Brayan Pena (ALL) |
| 7 | ANT | Chris Ray (ANT) | Cory Sullivan (ALL) | Chris Widger (ANT) | Ian Kinsler (U2-ALL) | DJ Houlton (ANT) |
| 8 | SPO | Brandon Wood (U1-SPO) | Omar Quintanilla (SPO) | Felix Pie (U2-SPO) | Anderson Hernandez (SPO) | Dustin McGowan (SPO) |
| 9 | GAL | Wandy Rodriguez (GAL) | Todd Coffey (GAL) | Tom Gorzelanny (GAL) | Marcus Thames (GAL) | Jose Bautista (GAL) |
| 10 | GEO | Scott Baker (GEO) | Brian N. Anderson (PHI) | Dustin Nippert (GAL) | Ja. Saltalamacchia (U1-GEO) | Matt Kemp (U2-GEO) |
| 11 | BRE | Yuniesky Betancourt (BRE) | Jonathan Broxton (HIG) | Aaron Hill (BRE) | Luis Rodriguez (HIG) | Andre Ethier (U2-BRE) |
| 12 | HIG | John Koronka (HIG) | Kenji Johjima (U1-BRE) | Melky Cabrera (HIG) | Kevin Correia (BRE) | Scott Proctor (HIG) |
| 13 | MAN | Chad Billingsley (U1-MAN) | Matt Treanor (CAL) | Josh Barfield (U2-CHA) | Ambiorix Burgos (MAN) | David Cortes (CAL) |
| 14 | CAL | Emil Brown (CAL) | John Rodriguez (MAN) | Brandon Medders (MAN) | Sandy Alomar (CAL) | Ryan Shealy (BET) |
| 15 | CHA | Ronny Cedeno (CHA) | Brad Thompson (MAN) | Alfredo Amezaga (CAL) | Dana Eveland (CHA) | Blaine Boyer (MAN) |
| 16 | RCH | Hector Carrasco (RCH) | Jose Hernandez (RCH) | Pablo Ozuna (RCH) | Joe McEwing (RCH) | Bernie Castro (RCH) |
| 17 | RIE | Mike Pelfrey (U2-RIE) | Dan Uggla (U1-PHI) | Alberto Castillo (RIE) | Oscar Robles (HIG) | John Halama (RIE) |
| 18 | BAT | Ervin Santana (BAT) | Josh Johnson (BAT) | Jered Weaver (U2-BAT) | Jason Botts (BAT) | Scott Cassidy (BAT) |
| 19 | PUG | Pedro Astacio (PUG) | Willy Aybar (MET) | Joe Mays (PUG) | Freddy Guzman (U2-MET) | Brad Eldred (PUG) |
| 20 | MET | Jason Repko (MET) | Jayson Werth (PUG) | Scott Munter (MET) | D.J. Carrasco (PUG) | Kelly Shoppach (MET) |
| 21 | SEA | Andy Sisco (SEA) | Pete Walker (SEA) | Mark Teahen (SEA) | Matt Belisle (SEA) | Paul Quantrill (SEA) |
| 22 | ALI | Paul Maholm (ALI) | Fernando Rodney (ALI) | Scott Olsen (ALL) | Shane Costa (ALI) | Ryan Spilborghs (ALI) |
| 23 | PNU | Clay Hensley (PNU) | Russell Martin (U2-PNU) | Pete Orr (PNU) | Rick Helling (PNU) | Jack Taschner (PNU) |
| 24 | BAL | Joel Zumaya (U2-MAN) | Robinson Tejeda (MAD) | Justin Huber (BAL) | Will Ohman (BAL) | Jeff Baker (BAL) |
| 6 | 7 | 8 | 9 | 10 | ||
| 1 | ROG | Scott Sauerbeck (BAL) | Einar Diaz (ROG) | Joe Saunders (MID) | Josh Paul (RIE) | Scott Seabol (MID) |
| 2 | MID | Joel Peralta (ALI) | Scott Hairston (ROG) | Ramon Vazquez (RIE) | Logan Kensing (MID) | Brian Shouse (RIE) |
| 3 | MAD | Yamid Haad (MAD) | Chris Denorfia (MAD) | Keiichi Yabu (MAD) | Jeff Bajenaru (MAD) | Kirt Birkins (U2-MAD) |
| 4 | PHI | J.P. Howell (PHI) | Ryan Garko (PHI) | Cody Ross (PHI) | Brandon Duckworth (PHI) | Adam Stern (PHI) |
| 5 | BET | Joe Beimel (BET) | Michael Tucker (BAL) | Hong-Chih Kuo (BET) | Chris Snelling (BET) | Jesse Garcia (BET) |
| 6 | ALL | Tim Stauffer (ANT) | Chris Duffy (ALL) | ANT - SKIPPED | Joey Devine (ALL) | ANT - SKIPPED |
| 7 | ANT | Travis Bowyer (ALL) | Ken Huckaby (ANT) | Darrell Rasner (ALL) | ANT - SKIPPED | John Grabow (ALL) |
| 8 | SPO | Randy Messenger (SPO) | Leo Nunez (SPO) | Rene Rivera (SPO) | Jeff Harris (SPO) | SPO - PASS |
| 9 | GAL | Andy Phillips (GAL) | Macay McBride(GAL) | Jose Valentin (ROG) | Mike Remlinger (GAL) | Mike DiFelice (GAL) |
| 10 | GEO | Ezequiel Astacio (GEO) | Rheal Cormier (GEO) | Pedro Lopez (GAL) | Jose Lima (GEO) | Roberto Novoa (GEO) |
| 11 | BRE | Aaron Guiel (HIG) | Joe Borchard (BRE) | Luke Scott (HIG) | Choo Freeman (BRE) | HIG - PASS |
| 12 | HIG | Tyler Johnson (BRE) | Tony Womack (HIG) | Paul Phillips (BRE) | HIG - PASS | Shin-Soo Choo (BRE) |
| 13 | MAN | Brian Shackelford (CHA) | Eddy Garabito (MAN) | Mike Napoli (U1-CAL) | Chris Duncan (CHA) | Craig Breslow (MAN) |
| 14 | CAL | Ken Harvey (MAN) | Seth McClung (CAL) | Eric Munson (CHA) | Frank Menechino (MAN) | CAL - PASS |
| 15 | CHA | Pete LaForest (CAL) | Paul Bako (CHA) | Jay Bergmann (MAN) | John Flaherty (CAL) | Donnie Murphy (CHA) |
| 16 | RCH | Mike Edwards (RCH) | Jacob Cruz (RCH) | Michael Ryan (RCH) | Henry Mateo (RCH) | Scott McClain (RCH) |
| 17 | RIE | Heath Bell (RIE) | Dan Kolb (RIE) | Wiki Gonzalez (RIE) | Travis Smith (RIE) | Adam Bernero (RIE) |
| 18 | BAT | Skip Schumaker (BAT) | Richard Hidalgo (BAT) | Brandon Watson (BAT) | Carlos Baerga (BAT) | Jeremi Gonzalez (BAT) |
| 19 | PUG | Scott Feldman (MET) | Josh Phelps (PUG) | Chris Magruder (MET) | Chip Ambres (PUG) | Sean Henn (MET) |
| 20 | MET | Timo Perez (PUG) | Vic Darensbourg (MET) | Greg Dobbs (PUG) | C.J. Wilson (MET) | Ruben Sierra (PUG) |
| 21 | SEA | Tony Giarratano (SEA) | Jorge De La Rosa (SEA) | Craig Dingman (SEA) | Jeff Nelson (SEA) | Pat Borders (SEA) |
| 22 | ALI | Matt Capps (MID) | Mike Gosling (PHI) | Marcos Carvajal (SPO) | Dan Wilson (ALI) | Ricky Nolasco (U2-ALI) |
| 23 | PNU | Nelson Cruz (PNU) | Rick Bauer (PNU) | Matt Perisho (PNU) | Ron Flores (PNU) | PNU - PASS |
| 24 | BAL | Manny Delcarmen (BAL) | Rich Hill (BAL) | Eddie Perez (BAL) | Aquilino Lopez (BAL) | Tim Byrdak (BAL) |
| 11 | 12 | |||||
| 1 | ROG | Chris Bootcheck (ROG) | Norihiro Nakamura (ROG) | |||
| 2 | MID | |||||
| 3 | MAD | Jesus Colome (MAD) | ||||
| 4 | PHI | |||||
| 5 | BET | Dane Sardinha (BET) | ||||
| 6 | ALL | |||||
| 7 | ANT | |||||
| 8 | SPO | |||||
| 9 | GAL | |||||
| 10 | GEO | |||||
| 11 | BRE | |||||
| 12 | HIG | |||||
| 13 | MAN | |||||
| 14 | CAL | |||||
| 15 | CHA | |||||
| 16 | RCH | |||||
| 17 | RIE | |||||
| 18 | BAT | |||||
| 19 | PUG | |||||
| 20 | MET | |||||
| 21 | SEA | |||||
| 22 | ALI | Chin-Hui Tsao (ALI) | ||||
| 23 | PNU | |||||
| 24 | BAL | |||||